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Supplemental Tables of "Data-Independent Acquisition-based global phosphoproteomics reveal the diverse roles of Casein kinase 1 in plant development"

Table S1. Sequences of the primers used in this study.docx

Table S2. Phosphopeptides with significantly altered abundance in seedlings overexpressing individual AEL genes (AEL1-OE, AEL2-OE, AEL3-OE, AEL4-OE) and lacking function of one or more AELs.xlsx

Table S3. Distribution of phosphorylated sites among serine, threonine, and tyrosine in AELs-overexpression or ael mutants lines compared to Col-0.xlsx

Table S4. AEL-upregulated phosphopeptides with higher abundance in AEL-OE lines relative to Col-0, or lower abundance in ael mutants compared to Col-0, respectively.xlsx 

Table S5. AEL-downregulated phosphopeptides with lower abundance in AEL-OE lines relative to Col-0, or higher abundance in ael mutants compared to Col-0, respectively.xlsx 

Table S6. Phosphoproteins corresponding to AEL-upregulated phosphopeptides were identified as putative substrates.xlsx 

Table S7. Putative substrate proteins of AELs in Arabidopsis predicted with the motifs identified in this study.xlsx 

Table S8. Functional analysis of total putative substrates of AELs in Arabidopsis with Gene ontology (GO) annotation.xlsx 

Table S9. Putative substrate proteins of CK1s in rice predicted with the motifs identified in this study.xlsx 

Table S10. Functional analysis of total putative substrates of CK1s in rice with Gene ontology (GO) annotation.xlsx 

Table S11. Putative substrate proteins of CK1s in mice predicted with the motifs identified in this study.xlsx 

Table S12. Functional analysis of total putative substrates of CK1s in mice with Gene ontology (GO) annotation.xlsx 

Table S13. Putative substrate proteins of CK1s in humans predicted with the motifs identified in this study.xlsx 

Table S14. Functional analysis of total putative substrates of CK1s in humans with Gene ontology (GO) annotation.xlsx 

Table S15. Conserved CK1 functions in both Arabidopsis and humans.xlsx